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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Rbbp4, retinoblastoma binding protein 4
Sequence ID:NM_009030
Entrez Gene ID:19646
Ensembl ID:ENSMUSG00000057236

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:4 D2.3|4

Chromosomal Position (from UCSC)

Chromosomal Position:4: 129333251 - 129335248

 Exon Info From UCSC:
NM_009030

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8861588Full LengthBC138568retinoblastoma binding protein 4
8861590Full LengthBC138570retinoblastoma binding protein 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033056  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009030 NP_033056   WD40

Related Sequences

 
mRNAGenPeptSwissProt
U35141 AAC52275 Q60972
BC138568 AAI38569 Q60972
BC138570 AAI38571 Q60972

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Rbbp4 NP_033056 H.sapiens RBBP4 5928 Gene Info NP_005601 100
R.norvegicus Rbbp4 313048   NP_001101382 100
A.gambiae AgaP_AGAP003228 1273902   XP_312936 93
D.melanogaster Caf1 41836   NP_001163617 91
C.elegans lin-53 172802   NP_492552 73
S.pombe mis16 2539214   NP_587881 55
N.crassa NCU06679 3877141   XP_960994 50

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta