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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Atrn, attractin
Sequence ID:NM_009730
Entrez Gene ID:11990
Ensembl ID:ENSMUSG00000027312

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2 F1|2 73.9 cM

Chromosomal Position (from UCSC)

Chromosomal Position:2: 130957020 - 131028443

 Exon Info From UCSC:
NM_009730

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9055666Full LengthBC141054attractin

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033860  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009730 NP_033860 Q9WU60 EGF
Laminin_EGF
CUB
Kelch_1
PSI
Kelch_2
EGF_2

Related Sequences

 
mRNAGenPeptSwissProt
AF116897 AAD20947 Q9WU60
AF119821 AAD25372 Q9WU60
BC141054 AAI41055 B9EIU3
AB093245 BAC41429 Q8CHF0
AK162539 BAE36961 Q3TRR6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Atrn NP_033860 R.norvegicus Atrn 83526   NP_112641 98
H.sapiens ATRN 8455 Gene Info NP_647537 94
A.gambiae AgaP_AGAP003506 1270925   XP_309653 44
D.melanogaster dsd 43315   NP_651571 39

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)