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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Prrxl1, paired related homeobox protein-like 1
Sequence ID:NM_001001796
Entrez Gene ID:107751
Ensembl ID:ENSMUSG00000041730

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:14 B|14

Chromosomal Position (from UCSC)

Chromosomal Position:14: 32599926 - 32649246

NM_001001796 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11383341311233413249
1392363341708133417178
2373383341840333418504
3395173342126133421439
5186303342152633421638
6317823346022633460377
78315503346166433462431

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9053913Full LengthBC171926paired related homeobox protein-like 1
40130890Full LengthBC132613paired related homeobox protein-like 1
40131220Full LengthBC145917paired related homeobox protein-like 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001001796  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001001796 NP_001001796 Q8BYH0 Homeobox

Related Sequences

 
mRNAGenPeptSwissProt
BC132613 AAI32614 Q8BYH0
BC145917 AAI45918 Q8BYH0
BC171926 AAI71926 B7ZW86
AY116506 AAM49062 Q8BYH0
EU670677 ACD45984 Q8BYH0
EU670678 ACD45985 Q8BYH0
AK039633 BAC30405 Q8BYH0

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)