Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. H2afz, H2A histone family, member Z
Sequence ID:NM_016750
Entrez Gene ID:51788
Ensembl ID:ENSMUSG00000037894

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:3 G3|3

Chromosomal Position (from UCSC)

Chromosomal Position:3: 137864590 - 137866818

NM_016750 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
198137527562137527659
99176137528096137528173
177290137528483137528596
291420137528974137529103
421957137529349137529885

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9007338Full LengthBC158035H2A histone family, member Z
9054285Full LengthBC171999H2A histone family, member Z
9056200Full LengthBC147478H2A histone family, member Z
30622912Full LengthBC079903H2A histone family, member Z

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_058030  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_016750 NP_058030 P0C0S6 Histone

Related Sequences

 
mRNAGenPeptSwissProt
U70494 AAB09578 P0C0S6
BC079903 AAH79903 P0C0S6
BC147478 AAI47479 P0C0S6
BC158035 AAI58036 P0C0S6
BC171999 AAI71999 P0C0S6
AY074806 AAL71864 P0C0S6
AK028176 BAC25791 P0C0S6
AK088704 BAC40515 P0C0S6
AK143572 BAE25443 P0C0S6
AK146181 BAE26959 P0C0S6
AK150454 BAE29574 P0C0S6
AK151052 BAE30069 P0C0S6
AK151462 BAE30420 Q3UA95
AK151509 BAE30460 P0C0S6
AK151868 BAE30756 P0C0S6
AK152398 BAE31186 P0C0S6
AK152848 BAE31541 P0C0S6
AK168178 BAE40138 P0C0S6
AK169003 BAE40802 Q3TFU6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus H2afz NP_058030 H.sapiens H2AFZ 3015 Gene Info NP_002097 100
R.norvegicus H2afz 58940   NP_073165 100
A.thaliana HTA9 841707   NP_175683 79

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)