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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Gabrq, gamma-aminobutyric acid (GABA) A receptor, subunit theta
Sequence ID:NM_020488
Entrez Gene ID:57249
Ensembl ID:ENSMUSG00000031344

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:X|X A6

Chromosomal Position (from UCSC)

Chromosomal Position:X: 72825435 - 72838544

NM_020488 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11697007077470070942
1702587007288870072976
2593267007699570077062
3275477007854670078766
5486307008043170080513
6317657008099570081129
7669187008149470081646
91911757008213970082395
117620007008305870083882

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8733823Full LengthBC119074gamma-aminobutyric acid (GABA-A) receptor, subunit theta
8733825Full LengthBC119076gamma-aminobutyric acid (GABA-A) receptor, subunit theta

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_065234  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_020488 NP_065234 Q9JLF1 Neur_chan_LBD
Neur_chan_memb

Related Sequences

 
mRNAGenPeptSwissProt
AF189260 AAF70381 Q9JLF1
BC119074 AAI19075 Q0VEX8
BC119076 AAI19077 Q0VEX8
AK164837 BAE37937 Q3TP00

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Gabrq NP_065234 R.norvegicus Gabrq 65187   NP_113921 95
H.sapiens GABRQ 55879 Gene Info NP_061028 79

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)