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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cst10, cystatin 10 (chondrocytes)
Sequence ID:NM_021405
Entrez Gene ID:58214
Ensembl ID:ENSMUSG00000033156

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2 G3|2

Chromosomal Position (from UCSC)

Chromosomal Position:2: 149405248 - 149410276

NM_021405 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1366149230984149231349
367480149233016149233129
481789149235705149236013

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4920219Full LengthBC048364cystatin 10 (chondrocytes)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_067380  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_021405 NP_067380 Q9JM84 Cystatin

Related Sequences

 
mRNAGenPeptSwissProt
BC048364 AAH48364 Q9JM84
AB036743 BAA95411 Q9JM84

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cst10 NP_067380 R.norvegicus Cst5 366219   NP_001102431 78
H.sapiens CST5 1473 Gene Info NP_001891 43

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)