Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Trim16, tripartite motif-containing 16
Sequence ID:NM_053169
Entrez Gene ID:94092
Ensembl ID:ENSMUSG00000047821

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11 B2|11

Chromosomal Position (from UCSC)

Chromosomal Position:11: 62837273 - 62841354

NM_053169 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
17476263375462634500
7488436264260462642699
84410776264748062647713
107812436265018062650345
124413396265073662650831
134038966265389362656449

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30057830Full LengthBC052821tripartite motif-containing 16

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_444399  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_053169 NP_444399   SPRY
zf-B_box

Related Sequences

 
mRNAGenPeptSwissProt
AF220134 AAG53507 Q99PP9
BC052821 AAH52821 Q99PP9
AF449496 AAM46701 Q99PP9
AK053139 BAC35278 Q99PP9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Trim16 NP_444399 R.norvegicus Trim16 303214   NP_001128505 93
H.sapiens TRIM16 10626 Gene Info NP_006461 79

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)