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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ly96, lymphocyte antigen 96
Sequence ID:NM_001159711
NM_016923
Entrez Gene ID:17087
Ensembl ID:ENSMUSG00000025779

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1 A3|1

Chromosomal Position (from UCSC)

Chromosomal Position:1: 16688455 - 16709605

 Exon Info From UCSC:
NM_001159711
NM_016923

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40126104Full LengthBC116785lymphocyte antigen 96

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_058619  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001159711 NP_001153183    
NM_016923 NP_058619 Q9JHF9 E1_DerP2_DerF2

Related Sequences

 
mRNAGenPeptSwissProt
AF168120 AAF89634 Q9JHF9
BC116785 AAI16786 Q14AM4
AY641431 AAU14221 Q64HC9
AB018550 BAA93619 Q9JHF9
AK019283 BAB31645 Q9JHF9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ly96 NP_058619 R.norvegicus Ly96 448830   NP_001019450 88
H.sapiens LY96 23643 Gene Info NP_056179 64

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)