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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Car5a, carbonic anhydrase 5a, mitochondrial
Sequence ID:NM_007608
Entrez Gene ID:12352
Ensembl ID:ENSMUSG00000025317

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8 E1|8 67.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:8: 121916145 - 121944867

NM_007608 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
10373124440043124440406
374529124441887124442042
530592124447454124447516
593688124447666124447761
689807124450982124451100
8081005124463534124463731
10061248124468569124468811

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5051543Full LengthBC030174carbonic anhydrase 5a, mitochondrial

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_031634  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_007608 NP_031634 P23589 EC 4.2.1.1 Carb_anhydrase

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC030174 AAH30174 P23589 EC 4.2.1.1
X51971 CAA36233 P23589 EC 4.2.1.1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Car5a NP_031634 R.norvegicus Car5a 54233   NP_062166 87
H.sapiens CA5A 763 Gene Info NP_001730 76

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)