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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Zc3h8, zinc finger CCCH type containing 8
Sequence ID:NM_020594
Entrez Gene ID:57432
Ensembl ID:ENSMUSG00000027387

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2 F1|2

Chromosomal Position (from UCSC)

Chromosomal Position:2: 128926269 - 128944019

NM_020594 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
49592128752003128752546
593634128754622128754663
635744128755582128755691
745856128756527128756638
857979128757013128757135
9801113128758934128759067
11141348128761047128761281
13491442128765578128765671
14431615128769583128769755

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6334861Full LengthBC048687zinc finger CCCH type containing 8

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_065619  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_020594 NP_065619 Q9JJ48 zf-CCCH

Related Sequences

 
mRNAGenPeptSwissProt
AF061961 AAF74513 Q9JJ48
BC048687 AAH48687 Q9JJ48
AK021376 BAB32390 Q9CTL7
AK132679 BAE21298 Q3TPC9
AK164491 BAE37808 Q3TPC9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Zc3h8 NP_065619 R.norvegicus Zc3h8 311414   NP_001012090 90
H.sapiens ZC3H8 84524 Gene Info NP_115883 79

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)