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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Exosc9, exosome component 9
Sequence ID:NM_019393
Entrez Gene ID:50911
Ensembl ID:ENSMUSG00000027714

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3 B|3

Chromosomal Position (from UCSC)

Chromosomal Position:3: 36552632 - 36565727

 Exon Info From UCSC:
NM_019393

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3711930Full LengthBC005622exosome component 9
6394529Full LengthBC052156exosome component 9
9007372Full LengthBC158075exosome component 9

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_062266  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_019393 NP_062266 Q9JHI7 RNase_PH
RNase_PH_C

Related Sequences

 
mRNAGenPeptSwissProt
AF152841 AAF73218 Q9JHI7
AF152842 AAF73219 Q9JHI7
BC005622 AAH05622 Q9JHI7
BC052156 AAH52156 Q9JHI7
BC158075 AAI58076 B2RY30
AK011636 BAB27749 Q9JHI7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Exosc9 NP_062266 R.norvegicus Exosc9 294975   NP_001020577 98
H.sapiens EXOSC9 5393 Gene Info NP_005024 92
A.gambiae AgaP_AGAP002348 1273616   XP_312616 47
S.pombe SPCC757.08 2539106   NP_587683 45
A.thaliana RRP45a 820485   NP_001030684 43
N.crassa NCU00334 3873975   XP_957805 43
A.thaliana CER7 825221   NP_001190143 39
S.cerevisiae RRP45 851874   NP_010566 36
C.elegans exos-9 176012   NP_741217 35
D.melanogaster Rrp45 32665   NP_573163 35

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)