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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Atg2b, autophagy related 2B
Sequence ID:NM_029654
Entrez Gene ID:76559
Ensembl ID:ENSMUSG00000041341

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12 E|12

Chromosomal Position (from UCSC)

Chromosomal Position:12: 105616138 - 105623142

 Exon Info From UCSC:
NM_029654

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6505402Full LengthBC062182ATG2 autophagy related 2 homolog B (S. cerevisiae)

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_029654 NP_083930 Q80XK6  

Related Sequences

 
mRNAGenPeptSwissProt
BC024533 AAH24533 Q80XK6
BC046427 AAH46427 Q80XK6
BC062182 AAH62182 Q80XK6
AK010577 BAB27040 Q80XK6
AK032840 BAC28052 Q80XK6
AK083213 BAC38812 Q80XK6
AK220468 BAD90495 Q5DTQ2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Atg2b NP_083930 H.sapiens ATG2B 55102 Gene Info NP_060506 91
A.gambiae AgaP_AGAP004092 1274010   XP_312964 36
D.melanogaster Atg2 38344   NP_647748 33
C.elegans atg-2 180949   NP_509145 27

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)