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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7
Sequence ID:NM_007390
Entrez Gene ID:11441
Ensembl ID:ENSMUSG00000030525

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7 C|7 30.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:7: 63098687 - 63212513

NM_007390 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
110517024357770244627
105211617024866570248774
116212487024986370249949
124914437025088970251083
144416117025243770252604
161216917025528270255361
169218017029346870293577
180218467030442270304466
184719867035699370357132
198720917035730770357411

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100069444Full LengthBC172636cholinergic receptor, nicotinic, alpha polypeptide 7

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_031416  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_007390 NP_031416 Q9JHD6
P49582
Neur_chan_LBD
Neur_chan_memb

Related Sequences

 
mRNAGenPeptSwissProt
L37663 AAC42053 Q53YJ9
P49582
AF225980 AAF35885 Q9JHD6
BC172636 AAI72636  
AF325348 AAL37364 Q8VI09
AY574266 AAS90362 Q53YJ9
P49582
AK034208 BAC28631 Q8CC01
AK157809 BAE34205 Q53YJ9
P49582

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Chrna7 NP_031416 R.norvegicus Chrna7 25302   NP_036964 100
H.sapiens CHRNA7 1139 Gene Info NP_000737 94
D.melanogaster nAcRalpha-34E 34826   NP_995708 53
A.gambiae AgaP_AGAP008588 1275447   XP_314691 52
C.elegans acr-19 191605   NP_492429 51

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)