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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Adamts5, a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 5 (aggrecanase-2)
Sequence ID:NM_011782
Entrez Gene ID:23794
Ensembl ID:ENSMUSG00000022894

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16 C3.3|16 62.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:16: 85862423 - 85900284

NM_011782 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
150218585840185863421
502251978586686485867039
519853738586827085868445
537455578586878385868966
555858418587015885870441
584260098587811485878281
601061428588806185888193
614381048589940885901369

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8861639Full LengthBC138619a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 5 (aggrecanase-2)
8861640Full LengthBC138620a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 5 (aggrecanase-2)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035912  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_011782 NP_035912 Q9R001 TSP_1
Reprolysin
Pep_M12B_propep
ADAM_spacer1

Related Sequences

 
mRNAGenPeptSwissProt
AF140673 AAD56356 Q9R001
BC138619 AAI38620 Q9R001
BC138620 AAI38621 Q9R001
AK044746 BAC32062 Q8BGP4
AK082475 BAC38503 Q8BGP4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Adamts5 NP_035912 R.norvegicus Adamts5 304135   NP_942056 97
H.sapiens ADAMTS5 11096 Gene Info NP_008969 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)