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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cd209d, CD209d antigen
Sequence ID:NM_130904
Entrez Gene ID:170779
Ensembl ID:ENSMUSG00000031495

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8 A1.1|8

Chromosomal Position (from UCSC)

Chromosomal Position:8: 3871823 - 3878499

NM_130904 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1830438718233872109
30541438737383873847
41556638762533876404
56764138770553877129
64273138778793877968
73281838782503878336
81988038784373878498

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100063905Full LengthBC160257CD209d antigen

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_570974  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_130904 NP_570974 Q91ZW8
Q3UW57
Lectin_C

Related Sequences

 
mRNAGenPeptSwissProt
BC160257 AAI60257  
AF373411 AAL13237 Q91ZW8
Q3UW57
AF440280 AAL33584 Q91ZW8
AK136586 BAE23062 Q91ZW8
Q3UW57

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cd209d NP_570974 R.norvegicus Clec4m 363856   NP_001102319 89

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)