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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Myf6, myogenic factor 6
Sequence ID:NM_008657
Entrez Gene ID:17878
Ensembl ID:ENSMUSG00000035923

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10 D1|10 59.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:10: 107492852 - 107494736

NM_008657 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1613106929915106930527
614704106930866106930956
7051248106931241106931784

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8733958Full LengthBC119209myogenic factor 6
8733960Full LengthBC119211myogenic factor 6

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032683  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_008657 NP_032683 P15375 HLH
Basic

Related Sequences

 
mRNAGenPeptSwissProt
BC119209 AAI19210 Q0VEJ7
BC119211 AAI19212 Q0VEJ7
AK029370 BAC26423 P15375
X59060 CAA41785 P15375

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Myf6 NP_032683 R.norvegicus Myf6 25714   NP_037304 99
H.sapiens MYF6 4618 Gene Info NP_002460 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)