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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Slc27a5, solute carrier family 27 (fatty acid transporter), member 5
Sequence ID:NM_009512
Entrez Gene ID:26459
Ensembl ID:ENSMUSG00000030382

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7 A1|7

Chromosomal Position (from UCSC)

Chromosomal Position:7: 12988475 - 12997981

NM_009512 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
83131357369513574000
3144441357408113574211
4455421357435813574455
5437411357470213574900
7428321357631513576405
83310271357649313576687
102811521357866313578787
115313111358022813580386
131215211358157913581788
152223361358272613583540

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4193567Full LengthBC013335solute carrier family 27 (fatty acid transporter), member 5
4193807Full LengthBC013272solute carrier family 27 (fatty acid transporter), member 5
40093476Full LengthBC115421solute carrier family 27 (fatty acid transporter), member 5
40131126Full LengthBC145823solute carrier family 27 (fatty acid transporter), member 5
40131128Full LengthBC145825solute carrier family 27 (fatty acid transporter), member 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033538  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_009512 NP_033538 Q4LDG0 EC 6.2.1.7 AMP-binding

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF072760 AAC40189 Q4LDG0 EC 6.2.1.7
BC013272 AAH13272 Q4LDG0 EC 6.2.1.7
BC013335 AAH13335 Q4LDG0 EC 6.2.1.7
BC115421 AAI15422 Q14C57  
BC145823 AAI45824 Q4LDG0 EC 6.2.1.7
BC145825 AAI45826 Q4LDG0 EC 6.2.1.7
AK144301 BAE25821 Q3UNC6  
AJ223959 CAA11688 Q4LDG0 EC 6.2.1.7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Slc27a5 NP_033538 R.norvegicus Slc27a5 79111   NP_077057 87
H.sapiens SLC27A5 10998 Gene Info NP_036386 72

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)