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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Slfn1, schlafen 1
Sequence ID:NM_011407
Entrez Gene ID:20555
Ensembl ID:ENSMUSG00000078763

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11 C|11 48.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:11: 83116844 - 83122659

NM_011407 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12188293034682930563
21918578293452282936160

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30073520Full LengthBC052869schlafen 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035537  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_011407 NP_035537 Q9Z0I7 AAA_4

Related Sequences

 
mRNAGenPeptSwissProt
AF099972 AAC83825 Q9Z0I7
BC052869 AAH52869 Q9Z0I7
AK138710 BAE23755 Q3UU73

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Slfn1 NP_035537 R.norvegicus Slfn1 688900   XP_001068751 77

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)