Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Vamp4, vesicle-associated membrane protein 4
Sequence ID:NM_016796
Entrez Gene ID:53330
Ensembl ID:ENSMUSG00000026696

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1 H1|1 85.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:1: 162574300 - 162594890

NM_016796 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
152164500958164501009
53171164504428164504546
172218164508002164508048
219269164511949164511999
270370164518326164518426
371450164519595164519674
451502164522756164522807
5032532164527179164529208

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8861775Full LengthBC138753vesicle-associated membrane protein 4
8861776Full LengthBC138754vesicle-associated membrane protein 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_058076  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_016796 NP_058076 Q8BSN6 Synaptobrevin

Related Sequences

 
mRNAGenPeptSwissProt
AF061516 AAC15776 O70480
BC138753 AAI38754 Q8BSN6
BC138754 AAI38755 Q8BSN6
AK011678 BAB27774 O70480
AK018344 BAB31171 O70480
AK031151 BAC27281 Q8BSN6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Vamp4 NP_058076 R.norvegicus Vamp4 364033   NP_001102326 100
H.sapiens VAMP4 8674 Gene Info NP_003753 96

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)