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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Fdx1, ferredoxin 1
Sequence ID:NM_007996
Entrez Gene ID:14148
Ensembl ID:ENSMUSG00000032051

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9|9 B

Chromosomal Position (from UCSC)

Chromosomal Position:9: 51943507 - 51963554

NM_007996 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
13435175141151751753
3444735175668151756810
4745985176517751765301
5998615177137551771637

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40130450Full LengthBC132173ferredoxin 1
40130452Full LengthBC132175ferredoxin 1
30847319IncompleteBC099518ferredoxin 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032022  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_007996 NP_032022 Q545P3
P46656
Fer2

Related Sequences

 
mRNAGenPeptSwissProt
L29123 AAA74303 Q545P3
P46656
BC099518 AAH99518 Q4FZG2
BC132173 AAI32174 Q545P3
BC132175 AAI32176 Q545P3
D43689 BAA07786 Q545P3
P46656
D43690 BAA07787 Q545P3
P46656
AK004879 BAB23637 Q545P3
P46656
AK148115 BAE28353 Q3UG56

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Fdx1 NP_032022 R.norvegicus Fdx1 29189   NP_058822 93
H.sapiens FDX1 2230 Gene Info NP_004100 78
D.melanogaster CG1319 38530   NP_647889 58
A.gambiae AgaP_AGAP003212 1273888   XP_312921 49

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)