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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Bcas2, Breast carcinoma amplified sequence 2
Sequence ID:NM_026602
Entrez Gene ID:68183
Ensembl ID:ENSMUSG00000005687

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:3 F2.2|3

Chromosomal Position (from UCSC)

Chromosomal Position:3: 103171748 - 103178641

NM_026602 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1155102975633102975787
156248102975870102975962
249319102977197102977267
320481102978262102978423
482532102979541102979591
533613102981261102981341
6141413102982277102983076

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4984289Full LengthBC037062breast carcinoma amplified sequence 2
5151893Full LengthBC023382breast carcinoma amplified sequence 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_080878  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_026602 NP_080878 Q9D287 BCAS2

Related Sequences

 
mRNAGenPeptSwissProt
BC023382 AAH23382 Q05CL7
BC037062 AAH37062 Q9D287
AY043239 AAK85306 Q9D287
AK005825 BAB24258 Q9D287
AK018786 BAB31409 Q9D287
AK020098 BAB31992 Q9D287
AK153513 BAE32056 Q3U5M2
AK166967 BAE39150 Q9D287

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Bcas2 NP_080878 H.sapiens BCAS2 10286 Gene Info NP_005863 100
R.norvegicus Bcas2 295334   NP_001099928 99
D.melanogaster CG4980 43348   NP_651596 60
A.gambiae AgaP_AGAP002305 1273664   XP_312666 59
C.elegans T12A2.7 188435   NP_498360 39
A.thaliana MOS4 821343   NP_566599 31

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)