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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Napa, N-ethylmaleimide sensitive fusion protein attachment protein alpha
Sequence ID:NM_025898
Entrez Gene ID:108124
Ensembl ID:ENSMUSG00000006024

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, synovium, testis, thymus, uncharacterized tissue
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:7 A2|7 15.2 cM

Chromosomal Position (from UCSC)

Chromosomal Position:7: 16098636 - 16117127

 Exon Info From UCSC:
NM_025898

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3584869Full LengthBC004804N-ethylmaleimide sensitive fusion protein attachment protein alpha

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_080174  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_025898 NP_080174 Q9DB05 NSF

Related Sequences

 
mRNAGenPeptSwissProt
BC004804 AAH04804 Q9DB05
AK005372 BAB23981 Q9DB05
AK013895 BAB29043 Q9CXX1
AK050623 BAC34348 Q9DB05
AK136689 BAE23100 Q9DB05
AK171998 BAE42767 Q9DB05

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Napa NP_080174 R.norvegicus Napa 140673   NP_542152 99
H.sapiens NAPA 8775 Gene Info NP_003818 98
A.gambiae AgaP_AGAP003192 1273863   XP_312889 68
D.melanogaster Snap 40233   NP_524180 63
C.elegans snap-1 179193   NP_505099 51
S.pombe sec17 2543488   NP_594169 37
S.cerevisiae SEC17 852230   NP_009503 36
N.crassa NCU01674 3873042   XP_956880 36

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)