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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Sdhd, succinate dehydrogenase complex, subunit D, integral membrane protein
Sequence ID:NM_025848
Entrez Gene ID:66925
Ensembl ID:ENSMUSG00000000171

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:9|9 B

Chromosomal Position (from UCSC)

Chromosomal Position:9: 50596347 - 50603812

NM_025848 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
49135040444550405354
91410585040686550407009
105911755040865250408768
117612875041184250411953

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40131034Full LengthBC145731succinate dehydrogenase complex, subunit D, integral membrane protein
40131036Full LengthBC145733succinate dehydrogenase complex, subunit D, integral membrane protein

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_080124  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_025848 NP_080124 Q9CXV1 CybS

Related Sequences

 
mRNAGenPeptSwissProt
BC145731 AAI45732 Q9CXV1
BC145733 AAI45734 Q9CXV1
AK013503 BAB28885 Q9D6J9
AK013962 BAB29086 Q9CXV1
AK135970 BAE22752 Q9CXV1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Sdhd NP_080124 R.norvegicus Sdhd 363061   NP_942083 92
H.sapiens SDHD 6392 Gene Info NP_002993 82
A.gambiae AgaP_AGAP000618 1271698   XP_310463 43
D.melanogaster CG10219 42808   NP_651181 39

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)