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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Mrpl39, mitochondrial ribosomal protein L39
Sequence ID:NM_017404
Entrez Gene ID:27393
Ensembl ID:ENSMUSG00000022889

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16 C3.3|16

Chromosomal Position (from UCSC)

Chromosomal Position:16: 84718282 - 84735220

NM_017404 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
151188471852584718628
1191668472051484720561
1673208472408284724235
3213868472536984725434
3874998472772884727840
5005678473066384730730
5686678473107284731171
6688078473258684732725
80810148473465184734857
101510428473539884735425

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2645316Full LengthBC016561mitochondrial ribosomal protein L39
3981658Full LengthBC012274mitochondrial ribosomal protein L39

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_017404 NP_059100 Q8CCX9
Q9JKF7
 

Related Sequences

 
mRNAGenPeptSwissProt
AF239728 AAF44697 Q9JKF7
BC012274 AAH12274 Q8CCX9
Q9JKF7
BC016561 AAH16561 Q9JKF7
AK007681 BAB25185 Q8CCX9
Q9JKF7
AK031942 BAC27613 Q8CCX9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Mrpl39 NP_059100 H.sapiens MRPL39 54148 Gene Info NP_059142 89
D.melanogaster mRpL39 39627   NP_524075 41
A.gambiae AgaP_AGAP010644 1272552   XP_311362 39

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)