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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Mixl1, Mix1 homeobox-like 1 (Xenopus laevis)
Sequence ID:NM_013729
Entrez Gene ID:27217
Ensembl ID:ENSMUSG00000026497

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1 H4|1

Chromosomal Position (from UCSC)

Chromosomal Position:1: 180694617 - 180697013

NM_013729 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
81879182623180182625051
18802294182626750182627164

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40040047Full LengthBC099876Mix1 homeobox-like 1 (Xenopus laevis)
40040048Full LengthBC099877Mix1 homeobox-like 1 (Xenopus laevis)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_038757  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_013729 NP_038757 Q9WUI0 Homeobox

Related Sequences

 
mRNAGenPeptSwissProt
AF135063 AAD25543 Q9WUI0
AF201959 AAF08314 Q9WUI0
BC099876 AAH99876 Q9WUI0
BC099877 AAH99877 Q9WUI0
AF154573 AAK59867 Q9WUI0
AK138043 BAE23542 Q3UUT2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Mixl1 NP_038757 R.norvegicus Mixl1 289311   NP_001099449 91
H.sapiens MIXL1 83881 Gene Info NP_114150 70

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)