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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Tbx5, T-box 5
Sequence ID:NM_011537
Entrez Gene ID:21388
Ensembl ID:ENSMUSG00000018263

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5 F|5 65.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:5: 119834902 - 119883502

NM_011537 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1615120284671120285285
616800120286884120287068
801895120288704120288798
8961015120290775120290894
10161163120291761120291908
11641316120294973120295125
13171408120303537120303628
14091635120321191120321417
16363941120332921120335226

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30548234Full LengthBC090639T-box 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035667  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_011537 NP_035667 Q5CZX7
P70326
T-box

Related Sequences

 
mRNAGenPeptSwissProt
U57330 AAC53109 P70326
AF140427 AAF00112 Q5CZX7
P70326
BC090639 AAH90639 Q5CZX7
P70326
AK044843 BAC32116 Q8BLK4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Tbx5 NP_035667 R.norvegicus Tbx5 304514   NP_001009964 99
H.sapiens TBX5 6910 Gene Info NP_852259 96

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)