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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Casr, calcium-sensing receptor
Sequence ID:NM_013803
Entrez Gene ID:12374
Ensembl ID:ENSMUSG00000051980

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16 B3|16 26.3 cM

Chromosomal Position (from UCSC)

Chromosomal Position:16: 36495267 - 36497639

NM_013803 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1622943649378136496059
229524183649767536497798
241926493650026236500492
265035343650967936510563
353538413651553936515845
384242683651768736518113
426945493656193936562219

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100068352Full LengthBC168383calcium-sensing receptor

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_038831  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_013803 NP_038831 Q9QY96 7tm_3
ANF_receptor
NCD3G

Related Sequences

 
mRNAGenPeptSwissProt
AF068900 AAC19388 Q9QY96
AF092941 AAC62116 O88982
AF110178 AAD28371 Q9QY96
AF110179 AAD28372 Q9QY96
AF128842 AAD40638 Q9QY96
AF159565 AAF00193 Q9QY96
BC168383 AAI68383  
AB027140 BAA77688 Q9QY96
AK029770 BAC26608 Q8CDP3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Casr NP_038831 R.norvegicus Casr 24247   NP_058692 98
H.sapiens CASR 846 Gene Info NP_001171536 94

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)