Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Scn5a, sodium channel, voltage-gated, type V, alpha
Sequence ID:NM_001253860
NM_021544
Entrez Gene ID:20271
Ensembl ID:ENSMUSG00000032511

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9 F3-F4|9 70.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:9: 119485229 - 119562672


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100069451Full LengthBC172643sodium channel, voltage-gated, type V, alpha

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_067519  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001253860 NP_001240789    
NM_021544 NP_067519 Q9JJV9 Ion_trans
Na_trans_assoc

Related Sequences

 
mRNAGenPeptSwissProt
BC172643 AAI72643  
GQ861509 ACW83021 D0ENM2
AK085822 BAC39544 Q8C3I3
AK147254 BAE27800 Q9JJV9
AK147517 BAE27966 Q9JJV9
AJ271477 CAB70096 Q9JJV9
AJ623273 CAF25043 Q6EWG4
AJ623274 CAF25044 Q6EWG3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Scn5a NP_067519 R.norvegicus Scn5a 25665   NP_037257 98
H.sapiens SCN5A 6331 Gene Info NP_001092874 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)