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Gene Info

Gene Information For:Mm. Chordc1, cysteine and histidine-rich domain (CHORD)-containing, zinc-binding protein 1
Sequence ID:NM_025844
Entrez Gene ID:66917
Ensembl ID:ENSMUSG00000001774

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, uncharacterized tissue
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:9|9 A3

Chromosomal Position (from UCSC)

Chromosomal Position:9: 18292266 - 18314000

 Exon Info From UCSC:
NM_025844

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4236535Full LengthBC018374cysteine and histidine-rich domain (CHORD)-containing, zinc-binding protein 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_080120  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_025844 NP_080120 Q9D1P4 CHORD
CS

Related Sequences

 
mRNAGenPeptSwissProt
BC018374 AAH18374 Q9D1P4
AK003259 BAB22675 Q9D1P4
AK012747 BAB28444 Q9D1P4
AK132696 BAE21307 Q9D1P4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Chordc1 NP_080120 R.norvegicus Chordc1 315447   NP_001101598 99
H.sapiens CHORDC1 26973 Gene Info NP_036256 96
A.gambiae AgaP_AGAP003061 1273739   XP_312747 46
A.gambiae AgaP_AGAP003064 4577001   XP_562821 46
D.melanogaster CHORD 42874   NP_651226 46
C.elegans chp-1 172138   NP_491519 39
N.crassa NCU03087 3880320   XP_964180 37
A.thaliana PBS2 835244   NP_568762 36

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)