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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Pcid2, PCI domain containing 2
Sequence ID:NM_178708
Entrez Gene ID:234069
Ensembl ID:ENSMUSG00000038542

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8 A1.1|8

Chromosomal Position (from UCSC)

Chromosomal Position:8: 13077580 - 13104832

 Exon Info From UCSC:
NM_178708

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40095328Full LengthBC118533PCI domain containing 2
3590683IncompleteBC006047PCI domain containing 2
6815702IncompleteBC072621PCI domain containing 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_848823  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_178708 NP_848823 Q8BFV2
Q8BNM3
PCI

Related Sequences

 
mRNAGenPeptSwissProt
BC006047 AAH06047 A0JLQ7
BC118533 AAI18534 Q8BFV2
AK042945 BAC31414 Q8BFV2
AK045796 BAC32494 Q8BFV2
AK048722 BAC33434 Q8BFV2
AK082891 BAC38672 Q8BNM3
AK163697 BAE37463 Q8BFV2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Pcid2 NP_848823 R.norvegicus RGD1307041 361182   NP_001162615 99
H.sapiens PCID2 55795 Gene Info NP_001120674 97
A.gambiae AgaP_AGAP008498 1277473   XP_316945 56
D.melanogaster PCID2 39306   NP_648486 51
C.elegans C27F2.10 175675   NP_498057 46
A.thaliana EER5 816475   NP_179546 39
S.pombe SPAC1B3.08 2542528   NP_594792 34
N.crassa NCU08388 3880084   XP_963935 34

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)