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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Rrp1b, ribosomal RNA processing 1 homolog B (S. cerevisiae)
Sequence ID:NM_001163734
NM_028244
Entrez Gene ID:72462
Ensembl ID:ENSMUSG00000058392

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17 B1|17

Chromosomal Position (from UCSC)

Chromosomal Position:17: 32051829 - 32057180

 Exon Info From UCSC:
NM_001163734
NM_028244

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3157173Full LengthBC016569ribosomal RNA processing 1 homolog B (S. cerevisiae)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_082520  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001163734 NP_001157206    
NM_028244 NP_082520 Q91YK2 Nop52

Related Sequences

 
mRNAGenPeptSwissProt
BC016569 AAH16569 Q91YK2
AK129078 BAC97888 Q6ZQH4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Rrp1b NP_082520 R.norvegicus Rrp1b 309673   XP_228076 87
H.sapiens RRP1B 23076 Gene Info NP_055871 65
A.thaliana AT5G20600 832182   NP_197560 32
C.elegans C47E12.7 177853   NP_501798 27

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)