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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Srsf10, serine/arginine-rich splicing factor 10
Sequence ID:NM_001080387
NM_010178
Entrez Gene ID:14105
Ensembl ID:ENSMUSG00000028676

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymphoreticular, mammary gland, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:4 D3|4

Chromosomal Position (from UCSC)

Chromosomal Position:4: 135856159 - 135865812

 Exon Info From UCSC:
NM_001080387
NM_010178

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5004611Full LengthBC037591FUS interacting protein (serine-arginine rich) 1
6419883Full LengthBC043060FUS interacting protein (serine-arginine rich) 1
6511807Full LengthBC083082FUS interacting protein (serine-arginine rich) 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034308  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001080387 NP_001073856    
NM_010178 NP_034308 Q3UA07 RRM_1

Related Sequences

 
mRNAGenPeptSwissProt
AF060490 AAC26715 Q9R0U0
AF042383 AAC70916 Q3UA07
Q9R0U0
BC037591 AAH37591 Q9R0U0
BC043060 AAH43060 Q9R0U0
BC083082 AAH83082 Q9R0U0
AB015894 BAA35092 Q9R0U0
AB015895 BAA35093 Q9R0U0
AK014345 BAB29286 Q9R0U0
AK005295 BAC25110 Q8CF51
AK134289 BAE22085 Q3UYX6
AK135316 BAE22485 Q3UXS8
AK149716 BAE29044 Q3UDH7
AK150072 BAE29284 Q3UDH7
AK150734 BAE29809 Q3UA07
AK151567 BAE30509 Q3UA07
AK168524 BAE40403 Q9R0U0
AK168558 BAE40431 Q9R0U0
AK168571 BAE40441 Q3UA07
AK169071 BAE40858 Q3TFP0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Srsf10 NP_001073856 A.thaliana SR33 841976   NP_564685 44
A.thaliana SCL30A 820559   NP_187966 42

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)