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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Scamp5, secretory carrier membrane protein 5
Sequence ID:NM_020270
Entrez Gene ID:56807
Ensembl ID:ENSMUSG00000040722

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9 B|9

Chromosomal Position (from UCSC)

Chromosomal Position:9: 57443645 - 57468021

NM_020270 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11726545728913357291670
265527725729317857293295
277328745729387857293979
287530315729488357295039
303231605729916257299290
316132155729978657299840
321633075731573957315830

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4511417Full LengthBC018613secretory carrier membrane protein 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_064666  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_020270 NP_064666 Q9JKD3 SCAMP

Related Sequences

 
mRNAGenPeptSwissProt
AF241833 AAF64491 Q9JKD3
BC018613 AAH18613 Q9JKD3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Scamp5 NP_064666 H.sapiens SCAMP5 192683 Gene Info NP_001171582 99

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)