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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Pex12, Peroxisomal biogenesis factor 12
Sequence ID:NM_134025
Entrez Gene ID:103737
Ensembl ID:ENSMUSG00000018733

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11 C|11

Chromosomal Position (from UCSC)

Chromosomal Position:11: 83294644 - 83298977

NM_134025 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
117968310814683109941
179723508311098983111542
235125888311181783112054
258927268311234183112478

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3671142Full LengthBC021800peroxisomal biogenesis factor 12

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_598786  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_134025 NP_598786 Q5SWQ8
Q8VC48
Pex2_Pex12

Related Sequences

 
mRNAGenPeptSwissProt
BC021800 AAH21800 Q5SWQ8
Q8VC48
AK035552 BAC29102 Q5SWQ8
Q8VC48
AK153798 BAE32186 Q5SWQ8
Q8VC48
AK166413 BAE38761 Q3TLN1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Pex12 NP_598786 R.norvegicus Pex12 116718   NP_446373 95
H.sapiens PEX12 5193 Gene Info NP_000277 89
C.elegans prx-12 181331   NP_509908 38
A.gambiae AgaP_AGAP010497 4577821   XP_001237561 36
N.crassa NCU05245 3878157   XP_962009 36
A.thaliana PEX12 819602   NP_187096 34
D.melanogaster pex12 33256   NP_608546 33

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)