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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Prx, periaxin
Sequence ID:NM_019412
NM_198048
Entrez Gene ID:19153
Ensembl ID:ENSMUSG00000053198

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7 A3|7 10.75 cM

Chromosomal Position (from UCSC)

Chromosomal Position:7: 27499323 - 27520214

 Exon Info From UCSC:
NM_019412
NM_198048

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30354483Full LengthBC068135periaxin

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_932165  NP_062285  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_019412 NP_062285   PDZ
NM_198048 NP_932165 O55103 PDZ

Related Sequences

 
mRNAGenPeptSwissProt
BC068135 AAH68135 Q6NVF7
AK173220 BAD32498 Q69ZE6
AJ222968 CAA11022 O55103
AJ222969 CAA11023 O55103

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Prx NP_932165 R.norvegicus Prx 78960   NP_076466 93
H.sapiens PRX 57716 Gene Info NP_870998 82

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)