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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Xirp1, xin actin-binding repeat containing 1
Sequence ID:NM_001081339
NM_011724
Entrez Gene ID:22437
Ensembl ID:ENSMUSG00000079243

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9 F4|9

Chromosomal Position (from UCSC)

Chromosomal Position:9: 120013754 - 120023569

Transcript StartTranscript EndChromosomal Start Chromosomal End
12280119922872119925151
22815674119925543119928936
56755839119932551119932715

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40098186Full LengthBC117959xin actin-binding repeat containing 1
40098187Full LengthBC117960xin actin-binding repeat containing 1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_011724 NP_035854    

Related Sequences

 
mRNAGenPeptSwissProt
AF051945 AAC06023 O70373
BC117959 AAI17960 O70373
BC117960 AAI17961 O70373

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Xirp1 NP_035854 R.norvegicus Xirp1 316071   XP_236702 89
H.sapiens XIRP1 165904 Gene Info NP_919269 78

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)