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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Irx5, Iroquois related homeobox 5 (Drosophila)
Sequence ID:NM_018826
Entrez Gene ID:54352
Ensembl ID:ENSMUSG00000031737

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8 C5|8 43.3 cM

Chromosomal Position (from UCSC)

Chromosomal Position:8: 92358183 - 92360767

NM_018826 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
16349488169494882327
63510409488343594883840
104124039488399294885354

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5716910Full LengthBC056994Iroquois related homeobox 5 (Drosophila)
6404946Full LengthBC051959Iroquois related homeobox 5 (Drosophila)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_061296  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_018826 NP_061296 Q9JKQ4 Homeobox

Related Sequences

 
mRNAGenPeptSwissProt
AF230074 AAF42871 Q9JKQ4
AF165985 AAF63955 Q9JKQ4
BC051959 AAH51959 Q9JKQ4
BC056994 AAH56994 Q9JKQ4
AK004747 BAB23528 Q9JKQ4
AJ271054 CAC14462 Q9ER76

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Irx5 NP_061296 R.norvegicus Irx5 498918   NP_001025215 98
H.sapiens IRX5 10265 Gene Info NP_005844 93

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)