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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Trpc4, transient receptor potential cation channel, subfamily C, member 4
Sequence ID:NM_001253682
NM_001253683
NM_016984
NR_046161
Entrez Gene ID:22066
Ensembl ID:ENSMUSG00000027748

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3 D|3 28.6 cM

Chromosomal Position (from UCSC)

Chromosomal Position:3: 54156239 - 54318470


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40129652Full LengthBC120729transient receptor potential cation channel, subfamily C, member 4
40130192Full LengthBC131915transient receptor potential cation channel, subfamily C, member 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_058680  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001253682 NP_001240611    
NM_001253683 NP_001240612    
NM_016984 NP_058680 Q9QUQ5 Ank
Ion_trans
TRP_2

Related Sequences

 
mRNAGenPeptSwissProt
U50921 AAC05178 Q9QUQ5
U50922 AAC05179 Q9QUQ5
AF011543 AAD10167 Q9QUQ5
AF019663 AAD10168 Q9QUQ5
AF190646 AAF01469 Q9QUQ5
BC120729 AAI20730 Q0VB97
BC131915 AAI31916 Q0VB97
AK080670 BAC37973 Q8BNT2
AK084139 BAC39124 Q8BNB6
X90697 CAA62230 Q9QUQ5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Trpc4 NP_058680 R.norvegicus Trpc4 84494   NP_536321 99
H.sapiens TRPC4 7223 Gene Info NP_003297 97
A.gambiae AgaP_AGAP008435 1277541   XP_317008 55
D.melanogaster trpgamma 34991   NP_001137830 55
C.elegans trp-2 192056   NP_001022703 49

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)