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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Slc47a1, solute carrier family 47, member 1
Sequence ID:NM_026183
Entrez Gene ID:67473
Ensembl ID:ENSMUSG00000010122

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11 B2|11

Chromosomal Position (from UCSC)

Chromosomal Position:11: 61343401 - 61378064

 Exon Info From UCSC:
NM_026183

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_080459  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_026183 NP_080459 Q8K0H1 MatE

Related Sequences

 
mRNAGenPeptSwissProt
AK004994 BAB23729 Q8K0H1
AK009038 BAB26040 Q8K0H1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Slc47a1 NP_080459 R.norvegicus Slc47a1 360539   NP_001014140 94
H.sapiens SLC47A1 55244 Gene Info NP_060712 78
A.thaliana AT5G52450 835321   NP_200058 34
A.thaliana AT2G34360 817999   NP_180983 33
A.thaliana AT1G73700 843705   NP_177511 32
S.cerevisiae ERC1 856427   NP_011897 28

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)