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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Adamts8, a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 8
Sequence ID:NM_013906
Entrez Gene ID:30806
Ensembl ID:ENSMUSG00000031994

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9 A4|9 9.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:9: 30942561 - 30962856

NM_013906 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
110393075014730751185
104012793075885030759089
128014153076017930760314
141615833076094030761107
158418883076205130762355
188920723076408030764263
207322453076649830766670
224624213076678630766961
242236323076923230770442

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100062510Full LengthBC156802a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 8
3603250IncompleteBC005780a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 8

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_038934  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_013906 NP_038934 P57110 TSP_1
Reprolysin
ADAM_spacer1

Related Sequences

 
mRNAGenPeptSwissProt
AF175282 AAF25805 P57110
BC005780 AAH05780 Q99JP1
BC156802 AAI56803  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Adamts8 NP_038934 H.sapiens ADAMTS8 11095 Gene Info NP_008968 82

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)