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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Smad4, SMAD family member 4
Sequence ID:NM_008540
Entrez Gene ID:17128
Ensembl ID:ENSMUSG00000024515

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, testis, thymus, uncharacterized tissue, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:18 E2|18 48.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:18: 73640256 - 73677911

 Exon Info From UCSC:
NM_008540

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6313280Full LengthBC046584MAD homolog 4 (Drosophila)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032566  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_008540 NP_032566 P97471 MH1
MH2

Related Sequences

 
mRNAGenPeptSwissProt
U79748 AAB57905 P97471
BC046584 AAH46584 P97471
AY493561 AAR85497  
GU072917 ADO32891 E3SRG7
GU072918 ADO32892 E3SRG8
GU072919 ADO32893 E3SRG9
GU072920 ADO32894 E3SRH0
AK004804 BAB23576 P97471

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Smad4 NP_032566 R.norvegicus Smad4 50554   NP_062148 100
H.sapiens SMAD4 4089 Gene Info NP_005350 99
D.melanogaster Med 43725   NP_733438 70
A.gambiae AgaP_AGAP002902 1273058   XP_311999 58

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta