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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. S100a6, S100 calcium binding protein A6 (calcyclin)
Sequence ID:NM_011313
Entrez Gene ID:20200
Ensembl ID:ENSMUSG00000001025

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3 F1-F2|3 43.6 cM

Chromosomal Position (from UCSC)

Chromosomal Position:3: 90613196 - 90614415

NM_011313 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
13339041681590417147
3344959041766490417825
4967199041811290418335

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3490662Full LengthBC003832S100 calcium binding protein A6 (calcyclin)
4219642Full LengthBC010774S100 calcium binding protein A6 (calcyclin)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035443  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_011313 NP_035443 P14069
Q545I9
efhand
S_100

Related Sequences

 
mRNAGenPeptSwissProt
M37761 AAA37358 P14069
Q545I9
BC003832 AAH03832 P14069
Q545I9
BC010774 AAH10774 P14069
Q545I9
AF549497 AAN59899 P14069
Q545I9
AK008241 BAB25552 P14069
Q545I9
AK008941 BAB25982 P14069
Q545I9
AK150408 BAE29534 P14069
Q545I9
AK151144 BAE30151 P14069
Q545I9
AK151587 BAE30527 P14069
Q545I9
X52278 CAA36521 P14069
X66449 CAA47065 P14069
Q545I9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus S100a6 NP_035443 R.norvegicus S100a6 85247   NP_445937 99
H.sapiens S100A6 6277 Gene Info NP_055439 97

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)