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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HDAC4, histone deacetylase 4
Sequence ID:NM_006037
RefSeqGene ID:NG_009235
Entrez Gene ID:9759
Ensembl ID:ENSG00000068024

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2q37.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 239970381 - 240322643

 Exon Info From UCSC:
NM_006037

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6067363Full LengthBC039904histone deacetylase 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006028  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_006037 NP_006028 P56524 EC 3.5.1.98 Hist_deacetyl

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF132607 AAD29046 P56524 EC 3.5.1.98
BC039904 AAH39904 Q86YH7  
AB006626 BAA22957 P56524 EC 3.5.1.98
AK302719 BAH13789 B7Z803  
AK303368 BAH13951 B7Z8G5  
AK303467 BAH13968 B7Z8I2  
AK303617 BAH13999 B7Z8L3  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HDAC4 NP_006028 M.musculus Hdac4 208727 Gene Info NP_997108 94
R.norvegicus Hdac4 363287   XP_343630 94
A.gambiae AgaP_AGAP000410 1271834   XP_310688 44
D.melanogaster HDAC4 32278   NP_572868 41

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta