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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. MCC, mutated in colorectal cancers
Sequence ID:NM_001085377
NM_002387
RefSeqGene ID:NG_012265
Entrez Gene ID:4163
Ensembl ID:ENSG00000171444

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5q21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 112360953 - 112630328

 Exon Info From UCSC:
NM_001085377
NM_002387

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4111706Full LengthBC009279mutated in colorectal cancers
4131685Full LengthBC018919mutated in colorectal cancers

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001085377 NP_001078846    
NM_002387 NP_002378 P23508  

Related Sequences

 
mRNAGenPeptSwissProt
M62397 AAA52069 P23508
BC009279 AAH09279 P23508
BC018919 AAH18919 P23508
EU832083 ACE86745  
EU831990 ACE87431  
AK128596 BAC87521 P23508
AK096212 BAG53232 B3KTX0
AK300259 BAH13246 B7Z6G0
BX537952 CAD97919 Q7Z3E9
AM393612 CAL38488  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens MCC NP_001078846 M.musculus Mcc 328949 Gene Info NP_001078842 95
R.norvegicus Mcc 307449   XP_225962 94
D.melanogaster CG34404 41873   NP_650457 31

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)