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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. GATA1, GATA binding protein 1 (globin transcription factor 1)
Sequence ID:NM_002049
RefSeqGene ID:NG_008846
Entrez Gene ID:2623
Ensembl ID:ENSG00000102145

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
ANEMIA, X-LINKED, WITH/WITHOUT NEUTROPENIA AND/OR PLATELET ABNORMALITIES 
LEUKEMIA, MEGAKARYOBLASTIC, WITH OR WITHOUT DOWN SYNDROME, SOMATICMTR
THROMBOCYTOPENIA WITH BETA-THALASSEMIA, X-LINKED 
THROMBOCYTOPENIA, X-LINKED, WITH OR WITHOUT DYSERYTHROPOIETIC ANEMIA 

Cytogenetic Location (from UniGene)

Cytogenetic Location:Xp11.23Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:X: 48644980 - 48652716

NM_002049 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1724864498148645052
733114864949748649735
3126894865025048650627
6908354865072948650874
8369614865157848651703
96214774865219948652714

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4048082Full LengthBC009797GATA binding protein 1 (globin transcription factor 1)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002040  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_002049 NP_002040 P15976 GATA

Related Sequences

 
mRNAGenPeptSwissProt
M30601 AAA35885 P15976
BC009797 AAH09797 P15976
X17254 CAA35120 P15976

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens GATA1 NP_002040 M.musculus Gata1 14460 Gene Info NP_032115 86
R.norvegicus Gata1 25172   NP_036896 86

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta