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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CLDN3, claudin 3
Sequence ID:NM_001306
RefSeqGene ID:NG_012023
Entrez Gene ID:1365
Ensembl ID:ENSG00000165215

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7q11.23Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:7: 73183329 - 73184566

NM_001306 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
4613187318332773184599

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4867858Full LengthBC016056claudin 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001297  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001306 NP_001297 O15551
Q75L79
PMP22_Claudin

Related Sequences

 
mRNAGenPeptSwissProt
BC016056 AAH16056 O15551
Q75L79
DQ892211 ABM83137  
EU176670 ABW03471  
AB000714 BAA22986 O15551
Q75L79
AK313276 BAG36084 Q75L79

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CLDN3 NP_001297 M.musculus Cldn3 12739 Gene Info NP_034032 91
R.norvegicus Cldn3 65130   NP_113888 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)