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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HOXB1, homeobox B1
Sequence ID:NM_002144
RefSeqGene ID:NG_032884
Entrez Gene ID:3211
Ensembl ID:ENSG00000120094

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
FACIAL PARESIS, HEREDITARY CONGENITAL, 3 

Cytogenetic Location (from UniGene)

Cytogenetic Location:17q21.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 46606858 - 46608272

NM_002144 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
14314660680646607236
43210144660768946608271

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40004081Full LengthBC096191homeobox B1
40004082Full LengthBC099633homeobox B1
40004085Full LengthBC096192homeobox B1
40004086Full LengthBC096193homeobox B1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002135  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_002144 NP_002135 P14653 Homeobox

Related Sequences

 
mRNAGenPeptSwissProt
BC096191 AAH96191 Q4VB03
BC096192 AAH96192 Q4VB01
BC096193 AAH96193 Q4VB01
BC099633 AAH99633 Q4VB03
X16666 CAA34656 P14653

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HOXB1 NP_002135 R.norvegicus Hoxb1 303491   XP_220896 88
M.musculus Hoxb1 15407 Gene Info NP_032292 87

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)