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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. EMP3, Epithelial membrane protein 3
Sequence ID:NM_001425
Entrez Gene ID:2014
Ensembl ID:ENSG00000142227

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19q13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 48828821 - 48833810

NM_001425 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12394882862848828866
2403324883008648830178
3334354883077748830879
4365764883260848832748
5778294883355748833809

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3891050Full LengthBC009718epithelial membrane protein 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001416  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001425 NP_001416 P54852 PMP22_Claudin

Related Sequences

 
mRNAGenPeptSwissProt
U52101 AAC50920 P54852
U87947 AAC51730 P54852
BC009718 AAH09718 P54852
BT007124 AAP35788 P54852
DQ893823 ABM84749  
DQ890644 ABM92261  
X94771 CAA64394 P54852
CR456871 CAG33152 Q6IBD3
CR541955 CAG46753 P54852

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens EMP3 NP_001416 R.norvegicus Emp3 81505   NP_110474 93
M.musculus Emp3 13732 Gene Info NP_001139818 92

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)