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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. GABRR1, gamma-aminobutyric acid (GABA) A receptor, rho 1
Sequence ID:NM_001256703
NM_001256704
NM_001267582
NM_002042
Entrez Gene ID:2569
Ensembl ID:ENSG00000146276

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6q15Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 89888047 - 89927087

Transcript StartTranscript EndChromosomal Start Chromosomal End
115608988722289888781
156117578989001089890206
175819108989162389891775
191120518989502889895168
205221348989988389899965
213523588990773889907961
235924268990908089909147
242725338991087789910983
253425848991315389913203
258531618992691989927495

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40146375Full LengthBC130344gamma-aminobutyric acid (GABA) receptor, rho 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002033  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001256703 NP_001243632    
NM_001256704 NP_001243633    
NM_001267582 NP_001254511    
NM_002042 NP_002033 P24046 Neur_chan_LBD
Neur_chan_memb

Related Sequences

 
mRNAGenPeptSwissProt
M62400 AAA52509 P24046
BC130344 AAI30345 P24046
AK296124 BAG58870 P24046
AK298948 BAG61047 B4DQT5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens GABRR1 NP_002033 R.norvegicus Gabrr1 29694   NP_058987 95
M.musculus Gabrr1 14408 Gene Info NP_032101 94

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)