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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PRDM16, PR domain containing 16
Sequence ID:NM_022114
NM_199454
RefSeqGene ID:NG_029576
Entrez Gene ID:63976
Ensembl ID:ENSG00000142611

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1p36.23-p33Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 2985791 - 3355183

 Exon Info From UCSC:
NM_022114
NM_199454

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8860117Full LengthBC161614PR domain containing 16
100068259Full LengthBC168363PR domain containing 16

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_022114 NP_071397 Q9HAZ2  
NM_199454 NP_955533    

Related Sequences

 
mRNAGenPeptSwissProt
AF294278 AAG33382 Q9HAZ2
BC161614 AAI61614 Q9HAZ2
BC168363 AAI68363  
AB051462 BAB21766 Q9HAZ2
AB078876 BAB84297 Q9HAZ2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PRDM16 NP_071397 M.musculus Prdm16 70673 Gene Info NP_081780 89

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)